Overview

Qingting Wei, Female, Ph.D., Associate Professor, Deputy Director of the Software Engineering Department, Master's Supervisor. Graduated with a Ph.D. in Computer Applied Technology from Tongji University in 2013. Primary research areas include intelligent computing and bioinformatics. Selected into the "Ganjiang Young Scholar" program under Nanchang University's 215 Talent Project in 2015. From 2017 to 2018, conducted research as a state-sponsored visiting scholar at the Bioinformatics and Computational Life Sciences Laboratory, University of Kansas, USA. Senior member of the China Computer Federation (CCF); Program Committee member of the IEEE International Conference on Bioinformatics and Biomedicine (BIBM); Executive Committee member of the CCF Bio-3News Young Scholars Symposium; and reviewer for journals such as Briefings in Bioinformatics and IEEE Journal of Biomedical and Health Informatics.

She has published more than 20 papers in domestic and international academic journals and conferences, authored one professional textbook, currently leads one National Natural Science Foundation Regional Project and one Jiangxi Provincial Natural Science Foundation General Project, and has undertaken over 10 additional national, provincial, university-level, and industry-sponsored projects. Holds one authorized invention patent and received one Second Prize of Science and Technology Award from the Ministry of Education. Awarded the Nanchang University Teaching Excellence Award twice, supervised three National Undergraduate Innovation and Entrepreneurship Training Programs, guided students to win approximately 20 national and provincial disciplinary competition awards, and was recognized as an Outstanding Undergraduate Supervisor at Nanchang University four times.

Fundings

1. National Natural Science Foundation Project, No. 62362050, Genomic Sequencing Data Compression and Two-Dimensional Random Access Method Based on Image Block Encoding, Jan 2024–Dec 2027, Ongoing, PI  

2. Jiangxi Provincial Natural Science Foundation General Project, No. 20252BAC240669, Research on Phage–Host Interaction Prediction Method Based on Multimodal Feature Fusion, Jun 2025–May 2028, Ongoing, PI  

3. Jiangxi Provincial Education Department Youth Science Fund Project, No. GJJ12147, Pattern-Aware GML Document Compression Algorithm Research, Jan 2011–Dec 2013, Completed, PI  

4. Industry Project: Inventory Management System Development for Jiangxi Chenyin Industrial Co., Ltd., Apr–Dec 2024, Ongoing, PI  

5. National Natural Science Foundation Project, No. 62262041, Image Anti-Forensics Based on Generative Adversarial Networks, Jan 2023–Dec 2026, , Ongoing, Third Contributor  

6. National Natural Science Foundation Project, No. 32260248, *Rational Design, Precise Synthesis, and Functional Validation of Bio-Nanobody Libraries*, Jan 2023–Dec 2026, ¥330,000, Ongoing, Participant.

Selected Publications

1. Shilun Luo, Hao Ye, Yufan Liu, Wenjie Zeng, Hongyu Zuo, Yuxin Jiang, and Qingting Wei*. IBDPred: IBD Prediction Using an Enhanced Stacking Ensemble Model Based on Gut Microbial Abundance Profiles. BIBM 2025.  

2. Yirui Zhou, Shiyang Long, and Qingting Wei*. FIBRA: A Random-Accessible Compression Scheme for FASTQ Files via Fibonacci Encoding and Wavelet Tree Indexing. BIBM 2025.  

3. Qingting Wei, Hong Zou, Cuncong Zhong, Jianfeng Xu*. RPfam: A refiner towards curated-like multiple sequence alignments of the Pfam protein families. Journal of Bioinformatics and Computational Biology, 2022, 20(4): 2240002-1–2240002-15.  

4. Qingting Wei, Xing Liu, Daming Xian, Jianfeng Xu*, Lan Liu, Shiyang Long. UICF: a new user-item composite filtering recommendation framework by leveraging temporal semantics. *International Journal of Intelligent Computing and Cybernetics, 2024, 17(3):577–604.  

5. Qingting Wei, Jihong Guan*, Shuigeng Zhou, Xin Wang. A New and Effective Approach to GML Documents Compression. The Computer Journal, 2014, 57(11).  

6. Qingting Wei, Jihong Guan*, Shuigeng Zhou. A GML Compression Method Based on Document Schema. Journal of Computer Research and Development, 2011, 48(9): 1704–1713. (in Chinese)  

7. Yiwen Qin, Jiayi Zhang, Chaomin Wu, Xiaofan Fu, Wenhui Yi, Hao Lin, Qingting Wei*, Zhui Tu. NANO: A Novel Database System for Nanobody Structures. Chinese Journal of Bioinformatics, 2024, 22(4). (in Chinese)  

8. Chuanyong Liu, Yanping Li, Qinghua He, Jinheng Fu, Qingting Wei, Zhui Tu*. Sequence-based Design and Construction of Synthetic Nanobody Library. Biotechnology and Bioengineering, 2024, 121(6): 1973–1985.  

9. Yanglan Gan*, Shanshan Liang, Qingting Wei, Guobing Zou. Identification of differential gene groups from single-cell transcriptomes using network entropy. Frontiers in Cell and Developmental Biology, section Molecular Medicine, 2020, 8(10).  

10. Jihong Guan, Qingting Wei, Shuigeng Zhou, Fubao Zhu. A GML Compression Method Based on Document Schema. Chinese Patent No. ZL201010148374X, Jan 25, 2012.  

11. Qingting Wei, Shuaibo Gao, Zhijie Chen, Ronghua Xu, Mingtao Cai. Nanobody-Antigen Complex Structure Prediction Software. Software Copyright Registration No. 2024SR0691526, May 21, 2024.  

12. Qingting Wei, Zhuowei Zeng, Xinyu Ding, Mengzhe Lian, Yuhang Zeng, Minghui Xia. Phage-Host Interaction Prediction Platform. Software Copyright Registration No. 2024SR1306226, Sep 4, 2024.

Graduate Student Recruitment

Recruiting graduate students interested in intelligent computing and bioinformatics. Research directions include but are not limited to:  

1. High-throughput sequencing data compression  

2. Phage–host interaction prediction  

3. Omics-based disease diagnosis  

4. AI-assisted drug development  

Candidates should demonstrate a passion for research, diligence, a strong work ethic, good teamwork skills, a solid foundation in computer science, programming ability, and proficient English reading and writing skills.

Interested students are welcome to contact via email: qtwei@ncu.edu.cn.

Teaching Experience

Spring 2024–2025: Algorithm Analysis and Design, Biological Data Analysis and Intelligent Computing  

Fall 2024–2025: Data Structures  

Spring 2023–2024: Algorithm Analysis and Design, Bioinformatics  

Fall 2023–2024: Algorithm Analysis and Design  

Spring 2022–2023: Bioinformatics  

Fall 2022–2023: Algorithm Analysis and Design  

Spring 2021–2022: Bioinformatics  

Spring 2020–2021: Data Structures and Algorithms, Bioinformatics  

Spring 2019–2020: Data Structures and Algorithms, Bioinformatics  

Spring 2018–2019: Advanced Algorithms (Graduate), Bioinformatics